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National Repository of Grey Literature 2 records found  Search took 0.00 seconds. 
Mitogenomic phylogeography and adaptive evolution of the bank vole Clethrionomys glareolus
 Filipi, Karolína ; Kotlík, Petr (advisor) ; Munclinger, Pavel (referee)
This thesis is a part of the project aimed at sequencing the genome and transcriptome of the bank vole (Clethrionomys glareolus). The role of natural selection in the evolution of mitochondrial DNA (mtDNA) has been subject to much discussion; while some studies did not provide evidence that selection affected the phylogeography of the studied species, other considered adaptive evolution important. The bank vole is the key model we use to study the adaptation to climate change. As with other species, the phylogeography of the bank vole has been based on the variation of a small part of mtDNA. The goal of the thesis was to sequence the entire mitochondrial genome for representatives of all main mtDNA lineages of the bank vole using the Sanger and Illumina technologies, and to assess the role of selection and adaptation in the evolution and phylogeography of this species. The adaptive evolution in mtDNA probably was not the main driving force during the postlacial colonization of Europe. However, signatures of adaptive evolution have been found - an amino acid change with possible functional consequences in one gene and an excess of radical changes in physical- chemical properties of amino acids in populations at the latitudinal (northern and southern) extremes of the bank vole distribution. Key...
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Protein Import into the Mitosomes of Giardia intestinalis
 Martincová, Eva ; Doležal, Pavel (advisor) ; Novotný, Marian (referee)
Mitochondrion is believed to be an ubiquitous organelle which occurred about 1,5 billion years ago by a single endosymbiotic event. Mitochondria is mostly dependent on the protein import from cytosol thus the establishment of protein import machinery was essential for seizing the new endosymbiont. Possibilities of studying the evolution of protein import machineries are quite limited given that no "free living" mitochondria or amitochondriate organisms are known nowadays. One alternative is to study mitochondrial secondary reductive evolution of anaerobic parasitic protists. Giardia intestinalis is flagellated protozoan living in microaerofilic environment of the small intestine. It containes one of the most reduced mitochondrion (mitosome) described so far. Hence it serves as a great model for studying mitochondrial evolution. Although it is well understood that all mitosomal proteins are transported from cytosol, many aspects of protein import pathway remain elusive. While the main channel Tom40 is present in the outer membrane, two other main translocases (Sam50 which is required for betta-barrel assembly in the outer membrane and Tim17/22/23 which is essential for protein translocation through the inner membrane) have not been identified so far. Protein translocation through Tim17/22/23 channel...
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